Jupyter Notebook

Interactive visualization using Vitessce

SpatialDatasets can be visualized interactively on LaminHub using Vitessce.

Here is a guide for visualizing spatial data with Vitessce.

This notebook adds the Vitessce visualization to this Xenium dataset discussed on the previous pages.

# clean up test instance
!rm -rf test-spatial
!lamin delete --force test-spatial
 deleting instance testuser1/test-spatial